clinFHIR is a web application that has been developed pretty much over the same time as FHIR has.

Originally developed to help clinicians visualize FHIR (hence the ‘clin’ in the name) it has become more widely used by the FHIR community for learning FHIR and assisting with design. It is maintained by David Hay - one of the FHIR Management Group co-chairs with support from InterSystems, which is much appreciated!

There are 4 modules that may be of interest to participants in the upcoming Interoperability contest.

• The Patient viewer for looking at an individual patients records
• Server Query which makes RESTful API calls against a FHIR server displaying the result in different formats
• Bundle Visualizer which will display the contents of a bundle
• Graph Builder which allows you to build graphs of interconnected resources.

I’ve created a longer post on google docs that goes into a little more details of these modules, with links to other resources such as my blog and the R4 Specification and R5 FHIR specification. I’ll be enhancing that over time - feel free to comment.

A note with regard to FHIR versions. The latest version is R5 (release 5), though many in the community still use R4. In most cases, if you're not sure then use R4. If you're not sure which version a FHIR Server supports, examine its CapabilityStatement which you can get from the server endpoint [host]/metadata

I should also point out that clinFHIR doesn’t currently use SSL. It is on the roadmap, but there are a few issues to work through. The consequence of this is that if you enter ‘clinfhir.com' into the browser, it may not find it. You sometimes have to specify http://clinfhir.com/ .

If you need further assistance, I would alway recommend using the FHIR chat, and if your question / comment / suggestion is related to clinFHIR then there’s a specific stream there.

Does anyone have an effective tool for anonymizing/deidentifying CCDAs for testing purposes?

Overview

In our previous post, we discussed the motivation for developing a chatbot agent with access to FHIR resources. In this post, we will dive into the high-level design aspects of integrating a Streamlit-based chat interface with a Java SpringBoot backend, and enabling a LangChain agent with access to FHIR (Fast Healthcare Interoperability Resources) via APIs.

Hello,

First of all thanks for your time, thoughts, teaching and help:

We wonder how could we get the metrics from http://[Ip]:[Port]/api/monitor/metrics and use them in Kibana to chart statistics.

We would like to ask you how do you use the api monitor metrics, and as a second question, how would you suggest to utilize them in a third party software as Kibana to chart them.

We have thought to do the following:

Based on the successful solution for my 2nd contribution to the Contest
I used an adapted version for this package. And have some findings I'd like to share.

Multiple communication steps over CPIPE may take time.
You won't recognize it on a fast machine. But a slower box with
Windows + Docker Desktop + your browser (and more) is neither
"Speedy Gonzales" nor a "Road Runner". 🙂

InterSystems FAQ rubric

A tool (^GLOBUFF utility) is available to check the database cache usage for each global variable.

You can run the utility directly or programmatically in the %SYS namespace.

Here's how to run the utility directly:

Hi,

I am trying to use a Jreport catalog which had been saved by a different user. But when I save the catalog I am getting an error "Access is denied".

So does that mean same catalog can't use by different users ?

Can anyone please provide a solution for the Jreport same catalog can use for different users. ?

Thanks

Jude

Enhanced Password Management: Edit Passwords Seamlessly

In the ever-evolving landscape of digital security, robust password management tools have become indispensable. Our password management application, designed to simplify and secure your online life, now comes with an enhanced feature – the ability to edit passwords with ease.

Why is this feature a game-changer?

For several years now Visual Studio Code has supported the notebook coding paradigm with a maturing UX and an API that is enabling a notebook extensions ecosystem to grow. One of the best-known notebook platforms is Jupyter Notebooks. A Microsoft team publishes an extension that allows VS Code to handle .ipynb notebook files. These can either work against a local Python environment or connect to a Jupyter Server, which typically hosts remote Python environments with beefier resources.

What if your InterSystems IRIS environments, whether local on your workstation or remote in your organization / cloud, could operate as Jupyter Servers? And not only for Embedded Python but also for ObjectScript and SQL

"If we build it, will they come?"

It can sometimes be useful to list or export all of the subclasses that are derived, directly or indirectly, from a given class. In Studio, the Class -> Derived Classes menu option will show such a list, but I'm not aware of a built-in API for programmatically exporting their source code.

Now the Classes/Rutines/DeepSee files will be automatically exported to the working directory after saving or compiling and files will be automatically deleted .

https://www.youtube.com/embed/B1pmqAQqd4M
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Installation

To install isc-dev , you just need to download and import the file isc-dev.xml from last release.
Some ways to import isc-dev .xml file:

• Go to Management Portal -> System Explorer -> Classes -> Import and select the XML file.
• Drag the file over Studio.
• Terminal command:

NS>do $system.OBJ.Load("yourpath/isc-dev.xml","ck")

• Get it from Package Manager Client:

NS>zpm
zpm: NS>install isc-dev

How to enable this feature:

• After importing the class in the target namespace, run the following method to set up the working directory:

NS>do ##class(dev.code).workdir("/path/to/your/working/directory/src/")

• Go to Management Portal -> System Administration -> Configuration -> Additional Settings -> Source Control.
• Select the target namespace and set the dev.FileManExtension class as the main one and save it.
• Try to create a new class in the studio and save/compile it
• Enjoy!

Intro

If you ever wondered how to debug some requests that are being made to or from IRIS, well here is a little tutorial on how to do that.

During a complex project, usually you get the specifications and implement the communication between IRIS and other things based on that. But from the paper to the real world there's usually a huge gap and you need to know why you are receiving an error on a parameter, on a header, you are not receiving the data and so on.

Let me introduce my new project, which is irissqlcli, REPL (Read-Eval-Print Loop) for InterSystems IRIS SQL

• Syntax Highlighting
• Suggestions (tables, functions)
• 20+ output formats
• stdin support
• Output to files

Install it with pip

pip install irissqlcli

Or run with docker

docker run -it caretdev/irissqlcli irissqlcli iris://_SYSTEM:SYS@host.docker.internal:1972/USER

Connect to IRIS

$ irissqlcli iris://_SYSTEM@localhost:1972/USER -W
Password for _SYSTEM:
Server:  InterSystems IRIS Version 2022.3.0.606 xDBC Protocol Version 65
Version: 0.1.0
[SQL]_SYSTEM@localhost:USER> select $ZVERSION
+---------------------------------------------------------------------------------------------------------+
| Expression_1                                                                                            |
+---------------------------------------------------------------------------------------------------------+
| IRIS for UNIX (Ubuntu Server LTS for ARM64 Containers) 2022.3 (Build 606U) Mon Jan 30 2023 09:05:12 EST |
+---------------------------------------------------------------------------------------------------------+
1 row in set
Time: 0.063s
[SQL]_SYSTEM@localhost:USER> help
+----------+-------------------+------------------------------------------------------------+
| Command  | Shortcut          | Description                                                |
+----------+-------------------+------------------------------------------------------------+
| .exit    | \q                | Exit.                                                      |
| .mode    | \T                | Change the table format used to output results.            |
| .once    | \o [-o] filename  | Append next result to an output file (overwrite using -o). |
| .schemas | \ds               | List schemas.                                              |
| .tables  | \dt [schema]      | List tables.                                               |
| \e       | \e                | Edit command with editor (uses $EDITOR).                   |
| help     | \?                | Show this help.                                            |
| nopager  | \n                | Disable pager, print to stdout.                            |
| notee    | notee             | Stop writing results to an output file.                    |
| pager    | \P [command]      | Set PAGER. Print the query results via PAGER.              |
| prompt   | \R                | Change prompt format.                                      |
| quit     | \q                | Quit.                                                      |
| tee      | tee [-o] filename | Append all results to an output file (overwrite using -o). |
+----------+-------------------+------------------------------------------------------------+
Time: 0.012s
[SQL]_SYSTEM@localhost:USER>

1.Background

1.1 I met a few project that their interface servers were crashed. Cutoms wanted resume server as fast as we can. their servers are running at lan,and they can't use git,there are some namesapce in the server running different service,and usualy there is only one server.

1.2 In the message,it has property in type of characterstream,as you know,the message search page doesn't support filtering with property of characterstream,so it's so hard to find the messge you want.